I am trying to write a small bash script to make my life easier for an analysis. I have multiple folders and inside them are 10 output files with an extension .pdbqt What I am trying to do is to read the folder content and then make a PyMol (.pml) file to load the molecules and then display it. When I close the PyMol, the script should go to the next folder and do the same thing again. Below I am pasting the code, any help is greatly appreciated
The output log.pml is:
I am not able to pass the argument in cat EOF section.
Kindly help
Thanks
Last edited by jim mcnamara; 10-05-2013 at 10:51 PM..
Hi, I'm a pretty big fan of BASH scripting. I've got a bunch I use for random things and lately a couple issues have been plaguing me.
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Hi
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It has to have these below to define the size of the label and what size to print the text
N
q609
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P1
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#! /bin/bash
# program to creat a backup copy for every deleted file or dierctores
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didn't work (2 Replies)