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ballview(1) [debian man page]

BALLView(1)						      General Commands Manual						       BALLView(1)

NAME
BALLView - A free molecular modeling and molecular graphics tool SYNOPSIS
BALLView [Molecular-file] DESCRIPTION
BALLView BALLView provides fast OpenGL-based visualization of molecular structures, molecular mechanics methods (minimization, MD simula- tion using the AMBER and CHARMM force fields), calculation and visualization of electrostatic properties (FDPB). BALLView is based on BALL (Biochemical Algorithms Library) , which is currently being developed in the groups of Oliver Kohlbacher (Univer- sity of Tuebingen, Germany), Andreas Hildebrandt (Saarland University, Saarbruecken, Germany), and Hans-Peter Lenhof (Saarland University, Saarbruecken, Germany). BALL is an application framework in C++ that has been specifically designed for rapid software development in Molecular Modeling and Computational Molecular Biology. It provides an extensive set of data structures as well as classes for Molecular Mechanics, advanced solvation methods, comparison and analysis of protein structures, file import/export, and visualization. BALLView is available under the LGPL licence. Homepage: www.BALLView.org USAGE
To run BALLView, simply type: BALLView or BALLView file.pdp where file.pdb is your PDB file. BALLView also supports HIN, MOL, MOL2 and SD files. BALLView provides HTML documentation, that is available in the application itself (see Help menu). This package also includes Python example scripts, that can be run in BALLView. They can be found under /usr/share/BALL/PYTHON. AUTHOR
BALLView is copyright 1998-2009 by the BALL project group SEE ALSO
http://www.ballview.org 24 January 2009 BALLView(1)

Check Out this Related Man Page

xmakemol(1)															       xmakemol(1)

NAME
XMakemol - A program for visualizing atomic and molecular systems. SYNOPSIS
xmakemol [options] DESCRIPTION
XMakemol is a program for viewing and manipulating atomic and molecular systems. XMakemol is a mouse-based application and many features can be accessed by clicking or dragging the mouse on the main window. Additional popup dialogs offer a number of additional features. OPTIONS
-a Switch off atoms. -b Switch off bonds. -h Switch on hydrogen bonds. -c Set the canvas colour. -e Set the bounding box colour. -f Read file on startup (use '-f -' for STDIN). -G Switch off GL rendering. -u Print usage information. -v Print version information. FILES
/usr/share/xmakemol/elements List of element properties. ENVIRONMENT VARIABLES
XM_ELEMENTS Specifies an alternative location for the elements file. EXAMPLES
To run this program the standard way type: xmakemol -f <filename> AUTHOR
Matthew P. Hodges <matt@tc.bham.ac.uk> XMakemol May 2004 xmakemol(1)
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