Login or Register to Ask a Question and Join Our Community

Linux and UNIX Man Pages

Linux & Unix Commands - Search Man Pages

cmtk-mk_adni_phantom(1) [debian man page]

mk_adni_phantom(1)				       The Computational Morphometry Toolkit					mk_adni_phantom(1)

NAME

       mk_adni_phantom - Generate ADNI phantom image

SYNOPSIS

       mk_adni_phantom OutputImage

DESCRIPTION

       Generate image of the ADNI structural imaging calibration phantom (a.k.a. Magphan EMR051).

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
	    Write list of basic command line options to standard output.

       --help-all
	    Write complete list of basic and advanced command line options to standard output.

       --wiki
	    Write list of command line options to standard output in MediaWiki markup.

       --man
	    Write man page source in 'nroff' markup to standard output.

       --version
	    Write toolkit version to standard output.

       --echo
	    Write the current command line to standard output.

       --verbose-level <integer>
	    Set verbosity level.

       --verbose, -v
	    Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
	    Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --resolution <double>
	    Set output image resolution in [mm] [Default: 1]

       --labels
	    Draw each marker sphere with a label value defined by its index in the marker table. Otherwise, estimated T1 is used.

       --write-labels <string>
	    Optional path to write text file with label names.	[Default: NONE]

       --write-landmarks <string>
	    Optional path to write text file with landmark locations.  [Default: NONE]

AUTHORS

       Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       From  April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and
       Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing).

CMTK 2.2.2							    Jul 20 2012 						mk_adni_phantom(1)

Check Out this Related Man Page

regress(1)					       The Computational Morphometry Toolkit						regress(1)

NAME

       regress - Regression

SYNOPSIS

       regress [options] controlFile

DESCRIPTION

       Linear (and higher-order polynomial) regression of deformation fields and images.

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
	    Write list of basic command line options to standard output.

       --help-all
	    Write complete list of basic and advanced command line options to standard output.

       --wiki
	    Write list of command line options to standard output in MediaWiki markup.

       --man
	    Write man page source in 'nroff' markup to standard output.

       --version
	    Write toolkit version to standard output.

       --echo
	    Write the current command line to standard output.

       --verbose-level <integer>
	    Set verbosity level.

       --verbose, -v
	    Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
	    Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --output <string>, -o <string>
	    File name for output.  [Default: NONE]

       --parameters <string>, -p <string>
	    Model parameters for regression instantiation [Default: NONE]

       --substitution <string>, -s <string>
	    Printf format string for ID-to-path substitition [Default: %s ]

       --order <integer>, -O <integer>
	    Polynonial order of the regression [default: 1=linear] [Default: 1]

AUTHORS

       Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       From  April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and
       Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing).

CMTK 2.2.2							    Jul 20 2012 							regress(1)
Man Page