landmark_warp(1) [debian man page]

LANDMARK_WARP(1)						    Plastimatch 						  LANDMARK_WARP(1)

NAME

       landmark_warp - warp an image using point landmarks

SYNOPSIS

       landmark_warp [options]

DESCRIPTION

       The landmark_warp executable performs registration by matching fiducials on reference and test images.  The list of possible options can be
       seen by typing:

       landmark_warp --help

       The command line usage is given as follows:

       Usage: landmark_warp [options]
       Options:
	-a, --algorithm <arg>	      RBF warping algorithm {tps,gauss,
				       wendland}
	-d, --default-value <arg>     Value to set for pixels with unknown
				       value
	    --dim <arg> 	      Size of output image in voxels "x [y z]"
	-F, --fixed <arg>	      Fixed image (match output size to this
				       image)
	-f, --fixed-landmarks <arg>   Input fixed landmarks
	-h, --help		      Display this help message
	-I, --input-image <arg>       Input image to warp
	-v, --input-vf <arg>	      Input vector field (applied prior to
				       landmark warping)
	-m, --moving-landmarks <arg>
				      Output moving landmarks
	-N, --numclusters <arg>       Number of clusters of landmarks
	    --origin <arg>	      Location of first image voxel
				       in mm "x y z"
	-O, --output-image <arg>      Output warped image
	-L, --output-landmarks <arg>
				      Output warped landmarks
	-V, --output-vf <arg>	      Output vector field
	-r, --radius <arg>	      Radius of radial basis function (in mm)
	    --spacing <arg>	      Voxel spacing in mm "x [y z]"
	-Y, --stiffness <arg>	      Young modulus (default = 0.0)

       Options "-a", "-r", "-Y", "-d" are set by default to:

       -a=gauss 	 Gaussian RBFs with infinite support
       -r=50.0		 Gaussian width 50 cm
       -Y=0.0		 No regularization of vector field
       -d=-1000 	 Air

       You may want to choose different algorithm:

       -a=tps		 Thin-plate splines (for global registration)
       -a=wendland	 Wendland RBFs with compact support (for
			  local registration)

       In the case of Wendland RBFs "-r" option sets the radius of support.

       Regularization of vector field is available for "gauss"	and "wendland" algorithms. To regularize the output vector field increase "-Y"	to
       '0.1' and up with increment '0.1'.

AUTHOR

       Plastimatch  is	a  collaborative  project.  For more documentation, please visit http://plastimatch.org.  For questions, comments, and bug
       reports, please visit http://groups.google.com/group/plastimatch.

COPYRIGHT

       Plastimatch development team (C) 2010-2011.  You are free to use, modify, and distribute plastimatch  according	to  a  BSD-style  license.
       Please see LICENSE.TXT for details.

Plastimatch 1.5 						   June 11, 2011						  LANDMARK_WARP(1)

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Ns_Thread2(3aolserver)					   AOLserver Library Procedures 				    Ns_Thread2(3aolserver)

__________________________________________________________________________________________________________________________________________________

NAME

       Ns_AbsTimedWaitForEvent,  Ns_AllocThreadLocalStorage, Ns_BeginDetachedThread, Ns_BeginThread, Ns_BroadcastEvent, Ns_DestroyCriticalSection,
       Ns_DestroyEvent, Ns_DestroyMutex, Ns_DestroyRWLock, Ns_DestroySemaphore, Ns_EnterCriticalSection, Ns_ExitThread, Ns_GetThread, Ns_GetThrea-
       dId,  Ns_GetThreadLocalStorage,	Ns_GetThreadServer,  Ns_InitializeCriticalSection, Ns_InitializeEvent, Ns_InitializeMutex, Ns_InitializeR-
       WLock,  Ns_InitializeSemaphore,	Ns_LeaveCriticalSection,  Ns_LockMutex,   Ns_ReadLockRWLock,   Ns_ReadUnlockRWLock,   Ns_ReleaseSemaphore,
       Ns_SetEvent,  Ns_SetThreadLocalStorage,	Ns_SetThreadServer,  Ns_TimedWaitForEvent, Ns_UTimedWaitForEvent, Ns_UnlockMutex, Ns_WaitForEvent,
       Ns_WaitForSemaphore, Ns_WaitForThread, Ns_WaitThread, Ns_WriteLockRWLock, Ns_WriteUnlockRWLock - library procedures

SYNOPSIS

       #include "ns.h"

       Ns_AbsTimedWaitForEvent(arg, arg)

       Ns_AllocThreadLocalStorage(arg, arg)

       Ns_BeginDetachedThread(arg, arg)

       Ns_BeginThread(arg, arg)

       Ns_BroadcastEvent(arg, arg)

       Ns_DestroyCriticalSection(arg, arg)

       Ns_DestroyEvent(arg, arg)

       Ns_DestroyMutex(arg, arg)

       Ns_DestroyRWLock(arg, arg)

       Ns_DestroySemaphore(arg, arg)

       Ns_EnterCriticalSection(arg, arg)

       Ns_ExitThread(arg, arg)

       Ns_GetThread(arg, arg)

       Ns_GetThreadId(arg, arg)

       Ns_GetThreadLocalStorage(arg, arg)

       Ns_GetThreadServer(arg, arg)

       Ns_InitializeCriticalSection(arg, arg)

       Ns_InitializeEvent(arg, arg)

       Ns_InitializeMutex(arg, arg)

       Ns_InitializeRWLock(arg, arg)

       Ns_InitializeSemaphore(arg, arg)

       Ns_LeaveCriticalSection(arg, arg)

       Ns_LockMutex(arg, arg)

       Ns_ReadLockRWLock(arg, arg)

       Ns_ReadUnlockRWLock(arg, arg)

       Ns_ReleaseSemaphore(arg, arg)

       Ns_SetEvent(arg, arg)

       Ns_SetThreadLocalStorage(arg, arg)

       Ns_SetThreadServer(arg, arg)

       Ns_TimedWaitForEvent(arg, arg)

       Ns_UTimedWaitForEvent(arg, arg)

       Ns_UnlockMutex(arg, arg)

       Ns_WaitForEvent(arg, arg)

       Ns_WaitForSemaphore(arg, arg)

       Ns_WaitForThread(arg, arg)

       Ns_WaitThread(arg, arg)

       Ns_WriteLockRWLock(arg, arg)

       Ns_WriteUnlockRWLock(arg, arg)
_________________________________________________________________

DESCRIPTION

       These functions ...

SEE ALSO

       nsd(1), info(n)

KEYWORDS

AOLserver								4.0						    Ns_Thread2(3aolserver)

Linux and UNIX Man Pages

landmark_warp(1) [debian man page]

Check Out this Related Man Page