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massxpert(1) [debian man page]

MASSXPERT(1)						      General Commands Manual						      MASSXPERT(1)

NAME

       massxpert - massXpert mass spectrometry software package (binary files)

SYNOPSIS

       massxpert [  < -h | --help > < -c | --config > < -v | --version > ]

DESCRIPTION

       This  manual  page  documents  briefly the massxpert-bin package that brings a mass spectrometric software suite for linear (bio-)polymers.
       This package contains an executable program (massxpert) that  provides  four  graphical	modules  that  are  used  to:  1)  define  polymer
       chemistries (XpertDef); 2) make use of the definitions in the massxpert's calculator module (XpertCalc) and 3) in its polymer sequence edi-
       tor/chemistry/mass spectrometry simulator (XpertEdit); 4) compare lists of (m/z,z) pairs so as to mine the data (XpertMiner).

OPTIONS

       -h, --help
	      Print a help message

       -c, --config
	      Print the configuration of the software when it was compiled (locations of the different data...);

       -v, --version
	      Print the version of the software along the with version of the Qt libraries used upon building of the software.

BIBLIOGRAPHICAL REFERENCE TO BE CITED

       F. Rusconi (2009) massXpert 2: a cross-platform software environment for polymer chemistry modelling and simulation/analysis of mass  spec-
       trometric data.	Bioinformatics, 25:2741-2742. doi:10.1093/bioinformatics/btp504.

SEE ALSO

       massxpert-data(7), massxpert-doc(7).

       The  program is documented fully in the massXpert User Manual, that is packaged in massxpert-doc. That manual is available in the form of a
       PDF-formatted file (/usr/share/doc/massxpert-doc/pdf/massxpert.pdf).

AUTHOR

       This manual page was written by Filippo Rusconi <rusconi-debian@laposte.net>. Permission is granted to copy, distribute and/or modify  this
       document under the terms of the GNU General Public License, Version 3, published by the Free Software Foundation.

	On   a	 Debian   system   the	 complete   text   of	the   GNU  General  Public  License  version  3  can  be  found  in  the  file	`-
       /usr/share/common-licenses/GPL-3'.

								  September 2009						      MASSXPERT(1)

Check Out this Related Man Page

sphinxsearch(1) 					      General Commands Manual						   sphinxsearch(1)

NAME

       searchd -- socket server handling search requests backed by Sphinx

SYNOPSIS

       searchd [--config CONFIGFILE]  [--cpustats]  [--iostats]  [--index INDEX]  [--port PORT]

       searchd --status [--config CONFIGFILE]  [--pidfile PIDFILE]

       searchd --stop [--config CONFIGFILE]  [--pidfile PIDFILE]

DESCRIPTION

       Sphinx is a collection of programs that aim to provide high quality fulltext search. searchd answers search requests coming in on a socket.

       This  manual  page was written for the Debian distribution because the original program does not have a manual page.  Instead, it has docu-
       mentation in HTML format, see below.

OPTIONS

       These programs follow the usual GNU command line syntax, with long options starting with  two  dashes  (`-').   A  summary  of  options	is
       included below.	For a complete description, see the HTML documentation.

       --config  Specify an alternate configuration file to use.

       --cpustats
		 Provide per-query CPU stats in searchd log.

       --iostats Provide per-query I/O stats in searchd log.

       -h	    --help
		 Show summary of options.

       --pidfile Used with --status and --stop to find the correct searchd.

       --status  Print status variables of a running searchd.

       --stop	 Send SIGTERM to a running searchd.

SEE ALSO

       indexer (1), search (1).

       Sphinx and it's programs are documented fully by the Spinx reference manual available in /usr/share/doc/sphinxsearch.

AUTHOR

       This  manual page was written by Christian Hofstaedtler ch+debian-packages@zeha.at for the Debian system (but may be used by others).  Per-
       mission is granted to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2	any  later
       version published by the Free Software Foundation.

       On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.

																   sphinxsearch(1)
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