MINCPIK(1) MINC User's Guide MINCPIK(1)NAME
mincpik - generate images from minc files
SYNOPSIS
mincpik [options] <infile>.mnc [<image.type>]
DESCRIPTION
mincpik generates image files from MINC volumes using the Imagemagick convert utility. For a complete list of output file types see the
convert man pages.
Currently if there is a time dimension in the file the image will only produced from the first time point
General options-verbose
print out extra information
-clobber
overwrite the output file if it exists already
-fake usually used in combination with -verbose to echo commands only
-slice slice number to get (note this is in voxel co-ordinates)
-scale scaling factor for resulting image, by default images are output at twice their original resolution
-width autoscale the resulting image to have a fixed image width (in pixels)
-depth bit-depth for resulting image 8 or 16 (MSB machines only)
-title add a title to the resulting image, if just this option is specified the text used for the title is the name of the input image
file. -title_text specify the title text to use. This option must be used in conjunction with -title
Image range and lookup table options
-range min max
valid range of values to use from MINC file
-image_range min max
range of image values to use for pixel intensity
-auto_range
automatically determine image range using a 5 and 95% PcT. (histogram)
-lookup arguments
arguments to pass to minclookup
Slicing options-transverse
get a transverse slice
-axial synonym for transverse
-coronal
get a coronal slice
-sagittal
get a sagital slice
-allthree
this option is deprecated, use -triplanar instead
Triplanar options-triplanar
create a triplanar view of the input MINC file
-tilesize
pixel size for each image in a triplanar
-sagittal_offset
offset the saggital slice from the centre in the triplanar
-vertical
create a vertical triplanar series of images (this is the default)
-horizontal
create a horizontal triplanar instead of a vertical one
Generic options for all commands:
-help Print summary of command-line options and abort.
AUTHOR
Andrew Janke - <a.janke@gmail.com>
SEE ALSO minclookup(1), convert(1), display(1).
$Date: 2009-08-11 13:49:19 $ MINCPIK(1)
Check Out this Related Man Page
pamdice(1) General Commands Manual pamdice(1)NAME
pamdice - slice a Netpbm image into many horizontally and/or vertically
SYNOPSIS
pamslice -outstem=filenamestem [-width=width] [-height=height] [-verbose] [filename]
You can use the minimum unique abbreviation of the options. You can use two hyphens instead of one. You can separate an option name from
its value with white space instead of an equals sign.
DESCRIPTION
Reads a PAM, PBM, PGM, or PPM image as input. Splits it horizontally and/or vertically into equal size pieces and writes them into sepa-
rate files as the same kind of image.
See the -outstem option for information on naming of the output files.
The -width and -height options determine the size of the output pieces.
pnmcat can rejoin the images.
OPTIONS -outstem=filenamestem
This option determines the names of the output files. Each output file is named filenamestem_y_x.type where filenamestem is the
value of the -outstem option, x and y are the horizontal and vertical locations, respectively, in the input image of the output
image, zero being the leftmost and top, and type is .pbm, .pgm, .ppm, or .pam, depending on the type of image.
-width=width
gives the width in pixels of the output images. The rightmost pieces are smaller than this if the input image is not a multiple of
width pixels wide.
-height=height
gives the height in pixels of the output images. The bottom pieces are smaller than this if the input image is not a multiple of
height pixels high.
-verbose
Print information about the processing to Standard Error.
SEE ALSO pamcut(1), pnmcat(1), pgmslice(1), pnm(5)AUTHOR
put by Bryan Henderson in the public domain in 2001
31 January 2001 pamdice(1)