TRANSFORMIX(1) User Commands TRANSFORMIX(1)NAME
transformix - apply geometric transform to an image
SYNOPSIS
transformix mandatory-args [optional-args]
DESCRIPTION
transformix applies a transform on an input image and/or generates a deformation field. The transform is specified in the transform-param-
eter file.
OPTIONS
Call transformix from the command line with mandatory arguments:
-out output directory
-tp transform-parameter file, only 1
Optional extra commands:
-in input image to deform
-def file containing input-image points
the point are transformed according to the specified transform-parameter file use "-def all" to transform all points from the
input-image, which effectively generates a deformation field.
-jac use "-jac all" to generate an image with the determinant of the spatial Jacobian
-jacmat use "-jacmat all" to generate an image with the spatial Jacobian matrix at each voxel
-priority set the process priority to high or belownormal (Windows only)
-threads set the maximum number of threads of transformix
At least one of the options "-in", "-def", "-jac", or "-jacmat" should be given.
The transform-parameter file must contain all the information necessary for transformix to run properly. That includes which transform to
use, with which parameters, etc. For a usable transform-parameter file, see the output of elastix.
SEE ALSO elastix(1)
Check the website http://elastix.isi.uu.nl, or mail elastix.support@gmail.com.
transformix version: 4.400 December 2010 TRANSFORMIX(1)
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ELASTIX(1) User Commands ELASTIX(1)NAME
elastix - perform image registration
SYNOPSIS
elastix mandatory-args [optional-args]
DESCRIPTION
elastix registers a moving image to a fixed image. The registration-process is specified in the parameter file.
OPTIONS
Call elastix from the command line with mandatory arguments:
-f fixed image
-m moving image
-out output directory
-p parameter file, elastix handles 1 or more "-p"
Optional extra commands:
-fMask mask for fixed image
-mMask mask for moving image
-t0 parameter file for initial transform
-priority set the process priority to high or belownormal (Windows only)
-threads set the maximum number of threads of elastix
The parameter-file must contain all the information necessary for elastix to run properly. That includes which metric to use, which opti-
mizer, which transform, etc. It must also contain information specific for the metric, optimizer, transform, ... For a usable parame-
ter-file, see the website.
SEE ALSO transformix(1)
Check the website http://elastix.isi.uu.nl, or mail elastix.support@gmail.com.
elastix version: 4.400 December 2010 ELASTIX(1)
hi
i have a function
abc()
{
//from this function i am passing some args to another function def()
}
def()
{
//Now i need to calculate the no of input args and iterate through them
}
please help (4 Replies)
Hello All,
Do you have any idea, how can I transform the unix time format to standard:
time_last_login=1268057983 :confused:
I would like to use the transformation in a AIX shell script :( (6 Replies)
Can I transform input like the below ?
Note: Insert zeros if there is no value to transform.
Input
key name score
key1 abc 10
key2 abc 20
key1 xxx 100
key2 xxx 20
key1 zzz 0
key2 zzz 29
key3 zzz 129
key1 yyy 39output
abc ... (1 Reply)
Hi all,
I pass to the transform algorithm two vectors, and the suma function.
#include <algorithm>
#include <iostream>
#include <iterator>
#include <vector>
using namespace std;
class Duo{
public:
int one;
int two;
};
Duo suma(Duo first, Duo last){
Duo ret;
... (1 Reply)
Hi, is it possible to add a number to all the values in a file and log transform them using awk. thanx in advance
input
name c1 c2 c3 c4
r1 0 0.2 0.3 0.4
r2 0 0 0 1
r3 1 0 0 0
r4 0 0 1 ... (1 Reply)