10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hi,
I came across one issue recently where output from one of the columns of the table from where i am creating input file has newline characters hence, record in the file is spread over multiple lines. Fields in the file are separated by pipe (|) delimiter. As header will never have newline... (4 Replies)
Discussion started by: Prathmesh
4 Replies
2. Shell Programming and Scripting
Hello:
I've input data:
Input data
--- 3:60069:C:T 60069 C T 1 0 0 1 0 0 1 0 0 1 0 0 1
--- 3:60079:A:G 60079 A G 1 0 0 0.988 0.012 0 1 0 0 1 0 0 1
--- rs186476240:60157:G:A 60157 G A 1 0 0 1 0 0 1 0 0 1 0 0 1
I edit/make first few columns before numbers (6th column) and want to... (4 Replies)
Discussion started by: genome
4 Replies
3. UNIX for Dummies Questions & Answers
I want to create a header with awk like this:
gawk 'BEGIN {print "List of Events"}
Desired output:
List of Events
Tennis
Baseball
But I am at a loss on how to do this. I can make a list like this:
List of Events
Tennis
Baseball
But I can't get a space to appear. I have... (4 Replies)
Discussion started by: newbie2010
4 Replies
4. Shell Programming and Scripting
Dear All,
could you please help me to remove \n characters after all other replacements have been done as in the code below:
{
#remove punctuation and starting whitespaces
gsub("]"," ");
$1=$1;
}
{
#print lines containing 'whatever'
if ($1=="whatever")
{print}
#print... (3 Replies)
Discussion started by: shivacoder
3 Replies
5. Shell Programming and Scripting
Experts,
i have a following file containing data in following manner.
1 2480434.4 885618.6 0.00 1948.00
40.00 1952.00
... (6 Replies)
Discussion started by: Amit.saini333
6 Replies
6. Shell Programming and Scripting
Hi, I have data of the following type,
chr1 234 678 39 852 638 abcd 7895
chr1 526 326 33 887 965 kilj 5849
Now, I would like to have something like this
chr1 234 678 39 852 638 abcd 7895 <a href="http://unix.com/thread=chr1:234-678">Link</a>
chr1 526 326 33 887 965 kilj 5849 <a... (5 Replies)
Discussion started by: jacobs.smith
5 Replies
7. Shell Programming and Scripting
Hi everyone,
Ok here's the scenario.
I have a control file like this.
component1,file1,file2,file3,file4,file5
component2,file1,file2,file3,file4,file5I want to do a while loop here to read all files for each component.
file_count=2
while ]
do
file_name=`cat list.txt | grep... (2 Replies)
Discussion started by: The Gamemaster
2 Replies
8. UNIX for Dummies Questions & Answers
Hello all. I have a problem that I need help solving.
I would like to convert the following file:
human pool1_12 10e-02 45 67
human pool1_1899 10e-01 45 29
human pool1_1829 10e-01 43 26
horse pool1_343 10e-20 65 191
horse pool1_454 10e-09 44 43... (5 Replies)
Discussion started by: viralnerd
5 Replies
9. Shell Programming and Scripting
I want to print the 1st field in a comma seperated file to lower case and the rest the case they are.
I tried this
nawk -F"," '{print tolower($0)}' OFS="," file
this converts whole line in to lower case i just want the first column to be converted.
The below doesnt work because in... (11 Replies)
Discussion started by: pinnacle
11 Replies
10. Shell Programming and Scripting
nawk -F "|" 'FNR==NR {a=$2 OFS $3 OFS $4 OFS $5 OFS $6;next}\
{if ($5 in a)print $1,"test",$5,a, $2,$3,$4 OFS OFS OFS OFS OFS OFS OFS OFS $2-$3-$4 ; \
else print $1,"Database",$5 OFS OFS OFS OFS OFS OFS $2,$3,$4 OFS OFS OFS OFS OFS OFS OFS OFS $2-$3-$4 }' OFS="|" \
file1 file2 > file3
This... (5 Replies)
Discussion started by: pinnacle
5 Replies