Do i need to put it in my perl script?
Or it is a linux command?
Sorry for the silly question.
And I want to generate output file name according to the file in A
such as
perl script.pl A/1.txt B/name.txt > C/1.gff
---------- Post updated at 04:19 PM ---------- Previous update was at 04:16 PM ----------
Do i need to put it in my perl script?
Or it is a linux command?
Sorry for the silly question.
And I want to generate output file name according to the file in A
such as
perl script.pl A/1.txt B/name.txt > C/1.gff
Hi Guys,
I've been having a look around to try and understand how i can do the below however havent come across anything that will work.
Basically I have a parser script that I need to run across all files in a certain directory, I can do this one my by one on comand line however I... (1 Reply)
Hi All,
I would like to use a Perl (not Bash) script to work with multiple files of the same name in different directories (all in the same parent directory). I tried to create a loop to do so, but it isn't working.
My code so far:
while (defined(my $file = glob("./*/filename.txt")) or... (1 Reply)
I have a script that I need to run on one file at a time. Unfortunately using for i in F* or cat F* is not possible. When I run the script using that, it jumbles the files and they are out of order. Here is the script:
gawk '{count++; keyword = $1}
END {
for (k in count)
{if (count == 2)... (18 Replies)
How can I Run one script on multiple files and print out multiple files.
FOR EXAMPLE
i want to run script.pl on 100 files named 1.txt ....100.txt under same directory and print out corresponding file 1.gff ....100.gff.THANKS (4 Replies)
How can I run the following command on multiple files and print out the corresponding multiple files.
perl script.pl genome.gff 1.txt > 1.gff
However, there are multiples files of 1.txt, from 1----100.txt
Thank you so much.
No duplicate posting! Continue here. (0 Replies)
Hello everyone,
I have two types of files in a directory:
*.txt
*.info
I have a perl script that uses these two files as arguments, and produces a result file:
perl myScript.pl abc.txt abc.xml
How can I run this script (in a "for" loop , looping through both types of files)... (4 Replies)
I have a local linux machine in which the files are dumped by a remote ubuntu server. If the process in remote server has any problem then empty files are created in local machine. Is there any way using perl script to check if the empty files are being created and delete them and then run a shell... (2 Replies)
Hi,
I want to run a Perl script on multiple files, with same name ("Data.txt") but in different directories (eg : 2010_06_09_A/Data.txt, 2010_06_09_B/Data.txt).
I know how to run this perl script on files in the same directory like:
for $i in *.txt
do
perl myscript.pl $i > $i.new... (8 Replies)
Hi,
I have thousands of files in a directory that have the following 2 formats:
289620178.aln
289620179.aln
289620180.aln
289620183.aln
289620184.aln
289620185.aln
289620186.aln
289620187.aln
289620188.aln
289620189.aln
289620190.aln
289620192.aln....
and:
alnCDS_1.fasta (1 Reply)
Question for anyone that might be able to help:
My objective is to eheck if a file (a source file) exists in a directory. If it does then, I'd like to call an application (Informatica ETL file...not necessary to know) to run a program which extracts data and loads it into multiple targets.
... (6 Replies)