10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Trying to use awk to store the value of $5 in file1 in array x. That array x is then used to search $4 of file1 to find aa match (I use x to skip the header in file1). Since $4 can have multiple strings in it seperated by a , (comma), I split them and iterate througn each split looking for a match.... (2 Replies)
Discussion started by: cmccabe
2 Replies
2. UNIX for Beginners Questions & Answers
I've written an awk script to compare two fields in two different files and then print portions of each file on the same line when matched. It works reasonably well, but every now and again, I notice some errors and cannot seem to figure out what the issue may be and am turning to you for help.
... (2 Replies)
Discussion started by: jvoot
2 Replies
3. Shell Programming and Scripting
In the awk below I am trying to output those lines that Match between file1 and file2, those Missing in file1, and those missing in file2. Using each $1,$2,$4,$5 value as a key to match on, that is if those 4 fields are found in both files the match, but if those 4 fields are not found then missing... (0 Replies)
Discussion started by: cmccabe
0 Replies
4. Shell Programming and Scripting
Trying to use awk to match the contents of each line in file1 with $5 in file2. Both files are tab-delimited and there may be a space or special character in the name being matched in file2, for example in file1 the name is BRCA1 but in file2 the name is BRCA 1 or in file1 name is BCR but in file2... (6 Replies)
Discussion started by: cmccabe
6 Replies
5. Shell Programming and Scripting
Trying to combine the matching $5 values between file1 and file2. If a match is found then the last $6 value in the match and the sum of $7 are outputted to a new file. The awk below I hope is a good start. Thank you :).
file1
chr12 9221325 9221448 chr12:9221325-9221448 A2M 1... (5 Replies)
Discussion started by: cmccabe
5 Replies
6. Shell Programming and Scripting
I need to take 2 input files and create 1 output based on matches from each file. I am looking to match field #1 in both files (Userid) and create an output file that will be a combination of fields from
both file1 and file2 if there are any differences in the fields 2,3,4,5,or 6.
Below is an... (5 Replies)
Discussion started by: ambroze
5 Replies
7. Shell Programming and Scripting
Hi everybody (first time posting here)
I have a file1 that looks like >
1,101,0.1,0.1
1,26,0.1,0.1
1,3,0.1,0.1
1,97,0.5,0.5
1,98,8.1,0.218919
1,99,6.2,0.248
2,101,0.1,0.1
2,24,3.1,0.147619
2,25,23.5,0.559524
2,26,34,0.723404with 762 lines..
I have another 'similar' file2 >
... (10 Replies)
Discussion started by: murpholinox
10 Replies
8. Shell Programming and Scripting
Howdy!
I have multiple files with tab-separated data:
File1_filtered.txt
gnl|Amel_4.0|Group3.29 1 G R 42 42 60 15 ,.AAA.aa,aa.A.. hh00/f//hD/h/hh
gnl|Amel_4.0|Group3.29 2 C Y 36 36 60 5 T.,T, LggJh
gnl|Amel_4.0|Group3.29 3 A R 27 27 60 9 Gg,,.gg., B6hcc22_c
File2_filtered.txt
... (3 Replies)
Discussion started by: sramirez
3 Replies
9. Shell Programming and Scripting
I have two files that have the date field in common. I request your help with some script that divide each field value from file1 by the correspond field value of the file2 only when the field date is equal in both files. Thanks in advance !
This is a sample of the files
file 1
12/16/2010,... (2 Replies)
Discussion started by: csierra
2 Replies
10. Shell Programming and Scripting
I am trying to break a string into separate fields and print the field that matches a pattern. I am using awk at the moment and have gotten this far:
awk '{for(i=1;i<=NF;++i)print "\t" $i}' longstring
This breaks the string into fields and prints each field on a separate line.
I want to add... (2 Replies)
Discussion started by: Moxy
2 Replies