10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hi,
I need help to match patterns from between two different files and extract region of strings.
inputfile1.fa
>l-WR24-1:1
GCCGGCGTCGCGGTTGCTCGCGCTCTGGGCGCTGGCGGCTGTGGCTCTACCCGGCTCCGG
GGCGGAGGGCGACGGCGGGTGGTGAGCGGCCCGGGAGGGGCCGGGCGGTGGGGTCACGTG... (4 Replies)
Discussion started by: bunny_merah19
4 Replies
2. Shell Programming and Scripting
I have two files: file 1
http://www.hello.com http://neo.com/peace/development.html, www.japan.com, http://example.com/abc/abc.html
http://news.net http://lolz.com/country/list.html,www.telecom.net, www.highlands.net, www.software.com
http://example2.com ... (1 Reply)
Discussion started by: csim_mohan
1 Replies
3. Shell Programming and Scripting
Hi,
I wasn't quite sure how to title this one! Here goes:
I have some already partially parsed log files, which I now need to extract info from. Because of the way they are originally and the fact they have been partially processed already, I can't make any assumptions on the number of... (8 Replies)
Discussion started by: chrissycc
8 Replies
4. Shell Programming and Scripting
Hello All Unix Users,
I am still new to Unix, however I am eager to learn it..
I have 2 files, some lines have some matching substrings, I would like to concatenate these lines into one lines, leaving other untouched. Here below is an example for that..
File 1 (fasta file):
>292183... (6 Replies)
Discussion started by: Mohamed EL Hadi
6 Replies
5. UNIX for Dummies Questions & Answers
Hello,
I want to extract columns from file2 to file3 by matching ids between file1 and file2. The extracted columns should be in same order as file1 ids.
for example:
file1.txt
1823
607
R2A9
802
771
file2.txt
1823 1 2 4
22 11 4 29
607 12 3 3
R2A9... (8 Replies)
Discussion started by: ryan9011
8 Replies
6. Shell Programming and Scripting
I want to compare file 1 to file 2 and if a string from file 1 appears in file 2, then print the file 2 row, where the string appears, onto file3.
file 1 looks like this.
DOG_0004340 blah blah2 j 22424
DOG_3010311 blah blah3 o 24500
DOG_9949221 blah blah6 x 35035
file 2 looks like... (5 Replies)
Discussion started by: verse123
5 Replies
7. Shell Programming and Scripting
Hi all,
i've a string
$DIR=/u/user/NDE/TEST_LOGS/20110622_000005_TEST_11_HD_120/HD/TEST_11_HD_120/hd-12
i need to extract string from 2011.... i.e i need it as 20110622_000005_TEST_11_HD_120 as matched string, and in turn i need to split values 20110622_000005_TEST_11_HD_120 into two.... (6 Replies)
Discussion started by: asak
6 Replies
8. Shell Programming and Scripting
Hi
I have a log file which has outputs like the one below
conn=24,196 op=1 RESULT err=0 tag=0 nentries=9 etime=3,712 dbtime=0 mem=486,183,328/2,147,483,648
Now most of the time I am only interested in the time ( the first column) and a column that begins with etime i.e... (8 Replies)
Discussion started by: pkabali
8 Replies
9. Shell Programming and Scripting
Hi Experts,
I have lots of big size files. Below is the snapshot of a file. From the files i want extract informmation like belows. What could be command or script for that?
DELETE
RESP:940120105
CREATE
RESP:0
GET
RESP:0
File contains like below-
...
...
<log... (8 Replies)
Discussion started by: thepurple
8 Replies
10. Shell Programming and Scripting
What would be the easiest way to grep all files within a particular directory that match a partial filename? For example, searching all files that begin with "filename.txt" and are appended with the date they were created. I am using Ksh 88, btw. (3 Replies)
Discussion started by: mharley
3 Replies