10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
I have two files A (2190 rows) and file B (1100 rows). I want to merge the contents of two files based on common field, also I need the unmatched rows from file A
file A:
ABC
XYZ
PQR
file B:
>LMN|chr1:11000-12456:
>ABC|chr15:176578-187678:
>PQR|chr3:14567-15866:
output... (3 Replies)
Discussion started by: Diya123
3 Replies
2. UNIX for Dummies Questions & Answers
Hi all,
I'm trying to join two .txt file tab delimitated based on a common column.
File 1
transcript_id gene_id length effective_length expected_count TPM FPKM IsoPct
comp1000201_c0_seq1 comp1000201_c0 337 183.51 0.00 0.00 0.00 0.00
comp1000297_c0_seq1 ... (1 Reply)
Discussion started by: alisrpp
1 Replies
3. Shell Programming and Scripting
Hello all,
I have 2 text files.
For example:
File1.txt contains data
A
B
C
D
****NEXT****
X
Y
Z
****NEXT****
L
M
N
and File2.txt contains data (13 Replies)
Discussion started by: vat1kor
13 Replies
4. Shell Programming and Scripting
I have this code
awk 'NR==FNR{a=$1;next} a' file1 file2
which does what I need it to do, but for only two files. I want to make it so that I can have multiple files (for example 30) and the code will return only the items that are in every single one of those files and ignore the ones... (7 Replies)
Discussion started by: castrojc
7 Replies
5. Shell Programming and Scripting
Hi
I have two sample files attached here
one file contain entries in one column and second file contains entries in many columns
I have to match entries of first file with entries in secon d file form secon column onwards and if matches write "match" in front of it.
I tried several... (11 Replies)
Discussion started by: manigrover
11 Replies
6. Shell Programming and Scripting
Hi,
I am trying to get the common entries from 2 files based on 1st field.. However when I try to do in perl I am getting blank output.. How can I do this in awk?
open(BUFF1, "my_genes");
open(BUFF3, "rawcounts");
#open(WRBUFF,">result_rawcounts");
while($line =<BUFF1>)
{
... (3 Replies)
Discussion started by: Diya123
3 Replies
7. Shell Programming and Scripting
Hi Friends,
I am new to Shell Scripting and need your help in the below situation.
- I have two files (File 1 and File 2) and the contents of the files are mentioned below.
- "Application handle" is the common field in both the files.
(NOTE :- PLEASE REFER TO THE ATTACHMENT "Compare files... (2 Replies)
Discussion started by: Santoshbn
2 Replies
8. UNIX for Dummies Questions & Answers
I have two files in UNIX.
1st file is Entity and Second File is References. 1st File has only one column named Entity ID and 2nd file has two columns Entity ID | Person ID.
I want to produce a output file where entity id's are matching in both the files.
Entity File
624197
624252
624264... (4 Replies)
Discussion started by: PRS
4 Replies
9. Shell Programming and Scripting
Hi experts,
Would you please help me with this?
I have several files and I need to join the forth field of them based on the common first field.
here's an example...
first file:
280346 39.88 -75.08 547.8
280690 39.23 -74.83 538.7
280729 40.83 -75.08 499.2
280907 40.9 -74.4 507.8... (5 Replies)
Discussion started by: GoldenFire
5 Replies
10. Shell Programming and Scripting
Hi All,
I do have 2 files
file 1 has 4 tab delimited columns
234 a c dfgyu
294 b g fih
302 c h jzh
328 z c san
597 f g son
File 2 has 2 tab delimted columns
234 23
302 24
597 24
I want to merge file 2 with file 1 based on the data common in both files which is the first column so... (6 Replies)
Discussion started by: Lucky Ali
6 Replies