img2cif(1) [debian man page]

IMG2CIF(1)						      General Commands Manual							IMG2CIF(1)

NAME

       img2cif - filter to convert detector images to CBF format

SYNOPSIS

       img2cif [options] files...

DESCRIPTION

       img2cif	is  a  program	that converts an image file from a MAR180, MAR300, MAR345 or ADSC CCD detector to CBF format. In addition, img2cif
       includes code to process files from stdin and to stdout, so the program can be used in a pipe.

OPTIONS

       -i input_image
	      (default: stdin) the input_image file in MAR300, MAR345 or ADSC CCD detector format is given.  If no input_image file  is  specified
	      or is given as "-", an image is copied from stdin to a temporary file.

       -o output_cif
	      (default: stdout) the output cif (if base64 or quoted-printable encoding is used) or cbf (if no encoding is used).  if no output_cif
	      is specified or is given as "-", the output is written to stdout

       -c compression_scheme
	      (packed, canonical or none, default packed)

       -m [no]headers
	      (default headers for cifs, noheaders for cbfs) selects MIME (N. Freed, N. Borenstein, RFC 2045, November 1996) headers within binary
	      data value text fields.

       -d [no]digest
	      (default	md5 digest [R. Rivest, RFC 1321, April 1992 using"RSA Data Security, Inc. MD5 Message-Digest Algorithm"] when MIME headers
	      are selected)

       -e encoding
	      (base64, quoted-printable, decimal, hexadecimal, octal or none, default: base64)	specifies  one	of  the  standard  MIME  encodings
	      (base64 or quoted-printable) or a non-standard decimal, hexamdecimal or octal encoding for an ascii cif or "none" for a binary cbf

       -b direction
	      (forward	or  backwards, default: natural direction) specifies the direction of mapping of bytes into words for decimal, hexadecimal
	      or octal output, marked by '>' for forward or '<' for backwards as the second character of each line of output, and in  '#'  comment
	      lines.

SEE ALSO

       convert_image(1), cif2cbf(1), makecbf(1).

AUTHOR

       img2cif was written by Herbert J. Bernstein.

       This manual page was written by Morten Kjeldgaard <mok@bioxray.au.dk>, for the Debian project (but may be used by others).

								    April 2008								IMG2CIF(1)

CIF2CBF(1)						      General Commands Manual							CIF2CBF(1)

NAME

       cif2cbf - convert a CIF to a CBF file

SYNOPSIS

       cif2cbf [options]

DESCRIPTION

       cif2cbf is a program that accepts either a CIF or a CBF as input and outputs a CBF file.

OPTIONS

       -i input_cif
	      (default:  stdin) the input file in CIF or CBF format.  If input_cif is not specified or is given as "-", it is copied from stdin to
	      a temporary file.

       -o output_cbf
	      (default: stdout) the output cif (if base64 or quoted-printable encoding is used) or cbf (if no encoding is used).  if no output_cif
	      is specified or is given as "-", the output is written to stdout if the output_cbf is /dev/null, no output is written.

       The remaining options specify the characteristics of the output cbf.  The characteristics of the input cif are derived from context.

       -c compression_scheme
	      (packed, canonical, byte_offset, v2packed, flatpacked or none, default packed)

       -m [no]headers
	      (default headers for cifs, noheaders for cbfs) selects MIME (N. Freed, N. Borenstein, RFC 2045, November 1996) headers within binary
	      data value text fields.

       -d [no]digest
	      (default md5 digest [R. Rivest, RFC 1321, April 1992 using"RSA Data Security, Inc. MD5 Message-Digest Algorithm"] when MIME  headers
	      are selected)

       -e encoding
	      (base64,	quoted-printable  or  none,  default base64) specifies one of the standard MIME encodings for an ascii cif or "none" for a
	      binary cbf

       -b byte_order
	      (forward or backwards, default forward (1234) on little-endian machines, backwards (4321) on big-endian machines

       -p K_of_padding
	      (0, 1, 2, 4) for no padding after binary data 1023, 2047 or 4095 bytes of padding after binary data

       -v dictionary
	      specifies a dictionary to be used to validate the input cif and to apply aliases to the output cif.  This option	may  be  specified
	      multiple times, with dictionaries layered in the order given.

       -w     process wide (2048 character) lines

SEE ALSO

       convert_image(1), img2cif(1), makecbf(1).

AUTHOR

       cif2cbf was written by Herbert J. Bernstein.

       This manual page was written by Morten Kjeldgaard <mok@bioxray.au.dk>, for the Debian project (but may be used by others).

								    April 2008								CIF2CBF(1)